LOCUS structure 740 aa DEFINITION structure 740 aa TITLE ORIGIN 1 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~CR1~~~ 61 ~~~~~~~~~~ ~~~P2a.1~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 121 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~CR 2~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 181 ~~~~~~P2a. 1~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 241 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~CR3~~ ~~~~~~~~~~ 301 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 361 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 421 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~CR4~~~ 481 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~CR5~~~~~ 541 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 601 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~CR6~~~~~~ ~~~~~~~~~~ 661 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ CR7~~~~~~~ ~~~~~~~~~~ 721 ~~~~~~~~~~ ~~~~CR8 // LOCUS structure 740 aa DEFINITION structure 740 aa TITLE structure ORIGIN 1 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ---------- 61 ~~~~~~~~~~ ~--------- ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 121 ~~~~~~~~~~ ~--------- -----~~--- -------~-- ---~~~~~~~ ~~~~~~~~~~ 181 ~~~------- ---~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 241 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ---------- ----~~~~~~ 301 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 361 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 421 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~- ---------- 481 -~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~---- ---------- ---------- 541 ---------- -~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 601 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~---- ---------~ ~~~~~~~~~~ 661 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~------ ---------~ ~~~~~~~~~~ 721 ~~~~~~~~~~ ~--------- // LOCUS Human 740 bp DEFINITION Human 740 bp TITLE Homo sapiens ORIGIN 1 GGGUUGCGGA GGGUGGGCCU GGGAG--GGG UGGUGGCCA- UUUUUU--GU CUAACCCUAA 61 CUGAGAAG-- GGCG-UAGGC -GCCGU--GC UUU-UGCUCC C--------- ---------- 121 ---------C GCGCGCUGUU UUUCU--CGC UGACUUU-CA GCGGGCG--G A-AAAGCCUC 181 G--GCCUG-C CGCC-UUCCA CCGUUCAUUC U--------- ---------- ---------- 241 ---------- ---------- -AGAGCAAA- ---CA----- AAAAAUGUC- -AGC-UGC-- 301 -UGG-CC-CG UUCGCCCCUC CC-----GGG GA-------- ----CCUGCG GCGGGUC--- 361 ---------- ---------- ---------- ---------- ---------- -GCCUGCCC- 421 ---------- AG-------C CCCCGAAC-- CCCG--CCUG G-------AG GCCGCGGUCG 481 GCCCG-GGGC UUC----UCC G---GAGGCA CCCACUGCCA CCGCGAAGAG UUGGGCUCUG 541 UCAGCCG--C GGG-UCUCUC GGGGG----C -GA-----GG GCG-AGGU-- ---------- 601 ---------- ------UCAG GCCUUUCAGG ---CCGCAGG -AAGAGGAA- CG-----GAG 661 C-GA-GUCCC -------CGC GCGCGGCGCG AUUCCC-UGA G-CUGUGGGA CGUGCAC--C 721 C-AGGACUCG -GCUCACACA UGC // LOCUS TreeShrew 740 bp DEFINITION TreeShrew 740 bp TITLE Tupaia glis belangeri ORIGIN 1 GGG-AGUGGA GGGUGGGCCC GGGAC--GGG CGCGGACCC- GGUA----AU CUAACCCUGA 61 CUCACAAGA- GGCG-UAGGC -GCCGU--GC UUU-UGCUCC C--------- ---------- 121 ---------C GCGCGCUGUU UUUCU--CGC UGACUUU-CA GCGUUCG--G A-AAAGCCCU 181 GUGGCCUA-U CGCC-AUCCA CCAUCCUUUC U--------- ---------- ---------- 241 ---------- ---------- -GGAACAAAC AGACAAAAAA AAAAAUGUC- -AGC-UGC-- 301 -UGG-UC-CG UUCGCUCCUC CC-----GGG -C-------- ----CCUGCG GUGGCCGCCA 361 GCCC------ ---------- ---------- ---------- ---------- -GCCCUCUC- 421 ---------- AU-------C CCCCGCGU-- CCCG--CCUA G-------AG GCCGCGGUCG 481 GCCCG-GGGC UUC----UCC G---GAGGUG CCCAUUGCCG CCGCGAAGAG UUAGGCUCUG 541 UCAGCCG--C GGG-CUCUCG GGGGG----C CCA-----GG GCG-AGGU-- ---------- 601 ---------- ------UUAG GCC-UCGUGG ---CCGCAGG -GACAGCAA- CG-----GAG 661 C-GG-GUCCC ------CGCG AGCCUGUGCG CGUCCC-UGA G-CCGUGGGA CUUGCAC--C 721 G-GGGACUUU -GCUCGGACA AUC // LOCUS Rabbit 740 bp DEFINITION Rabbit 740 bp TITLE Oryctolagus cuniculus ORIGIN 1 GGGCUGAGGA GGGUGGGCUC GGGAG--GGG CCC-GGUCA- UUUCUC--AU CUAACCCUAA 61 CUGAGCAG-- GGCG-UAGGC -GCCGC--GC UUU-UGUUUC CC-------- ---------- 121 ---------C GCGCGCUGUU UUUCU--CGC UGACUUU-CA GCGCGUG-GG A-AAAGCCUU 181 G--GCCUA-C CGCC-GUCCA CCGUUCAUUU C--------- ---------- ---------- 241 ---------- ---------- -GCAGUAAA- ---CA----- AAAAAUGUC- -AGC-CGC-- 301 -UGG-CC-GG UUCGCCCUUC CC-----GGG GA-------- ----CCUGCG GUGGCUC--- 361 ---------- ---------- ---------- ---------- ---------- -GCCCGCCC- 421 ---------- GG-------C CCCCGUGC-- CCCG--CCUG --------AG GCCGCGGUCG 481 GCCCG-GGGC UUC----UCC G---GAGGUG CCCAAUGCCG CCGCGAAGAG UUAGGCUCUG 541 UCAGCCG--C GGG-UCCCUC GGGGG----C CAA-----GG GCG-AGGC-- ---------- 601 ---------- ------GCAG GCC-GUCUGG ---CCGCAGG -GAGAGGAA- CG-----GAG 661 C-GG-GUCCC -------CCA GCGUGGUGCG CUUCCC-UGA G-CUGUGGGA CUUGCAC--C 721 C-GGGACUCG -GCUCAAACA CGC // LOCUS GuineaPig 740 bp DEFINITION GuineaPig 740 bp TITLE Cavia porcellus ORIGIN 1 ---------- ---------- GGGAG--GGG UGGUGGUCU- UCCCU---GU CUAACCCUAA 61 G-GUGAAGAG GACG-UGGGU -GCCGU--GU UUU-UCGCUC C--------- ---------- 121 ---------C GCACGCUGUU UUUCU--CGC UGACUUU-CA GCGUGCA--G A-AAAGCCUU 181 G--GCCUA-C CGUC-GGUUA UUGUCUAAUU A--------- ---------- ---------- 241 ---------- ---------- -GAAGCAAA- ---CA----- AAAAAUGUC- -AGC--G--- 301 -UGG-CC-GG GCCGCCCCUC CC-----GGA UA-------- ----CCUGCG GCGGCUC--- 361 ---------- ---------- ---------- ---------- ---------- -GUCCA-CC- 421 ---------- GG-------C CCCCGAGC-- CCCG--CCU- --------AG GCCGCGGCCG 481 GCGCG-GGGC UUC----CCU G---GAGGCG CCCAUGGCCG CCGCGAAGAG UUCGUCUCUG 541 UCAGCUG--C GGG-UCGCCC GGGGG----C CGC-----GG GAG-AGUC-- ---------- 601 ---------- ------CCAG GCC---UUGG ---CCGCAGG -GAGAGAAA- CG-----GAG 661 C-AG-GUCCU ---------C GCGCGGUGCA CUCCCC-UGA G-CUGUGGGA AGUGCAC--C 721 --GGGAC-GG -GCUCCUACA AGC // LOCUS Chinchilla 740 bp DEFINITION Chinchilla 740 bp TITLE Chinchilla brevicaudata ORIGIN 1 GGGUUGAGAA UGGUGGGCC- GGGAG--GGG AGGUGGGCA- UGUUUU--GU CUAACCCUAA 61 CUAGGAGGAG GACG-UAGGC -GCCGU--GC UUU-UGUUCC C--------- ---------- 121 ---------C GCGCGCUGUU UUUCU--CGC UGACUUU-CA GCGUGCG--G A-AAAGCCUU 181 G--GCCUG-C CGUC-GACCA CUGUCUAAUU A--------- ---------- ---------- 241 ---------- ---------- -AAAGCAAA- ---CA----- AAAAAUGUC- -AGC--G--- 301 -UGG-CC-GG UCCGCCCCUC CC-----GGG UA-------- ----CCUGCG GCAGCUC--- 361 ---------- ---------- ---------- ---------- ---------- -GCCCGGCU- 421 ---------- GG-------C CCCCGAGC-- CCCG--CCCA --------GG GCCACGGCUG 481 GCGCG-GGGC UUC----UCC G---GGAGCG CC-AUGGCCG CCGCGAAGAG UUCGUCUCUG 541 UCAGCCG--C GGG-UCGCGC GGGGG----C CGC-----GG GGG-AGUC-- ---------- 601 ---------- ------CUAG GCC-GAGUGG ---CCGCAGG -AAGAGAAA- CG-----GAG 661 C-CU-GUCCC -------UGU GCACGGGGCG CUUCUC-UGA G-CUGUGGGA AGUGCCC--C 721 --GAGACUCG -GCUCCUACA AGC // LOCUS Gopher 740 bp DEFINITION Gopher 740 bp TITLE Geomys breviceps ORIGIN 1 ---------- -GGCGUGCCU GGGAG--GGG GGGCUGGUC- CCACUC--UU CUAACCCUAA 61 GGGUGUC--- GGCUGUAGGC -GCCGU--GC UUUUUACUUC CC-------- ---------- 121 ---------C GCGCGCUGUU UUUCU--GGC UGGCUUU-CA GCGAGCG-GA A-AAAGCUUU 181 G--GUCUA-C AGGCCACUCA CUUUGUAUCC C--------- ---------- ---------- 241 ---------- ---------- -GAAACCAAA UU-GAAAAAA AAAAAUGCC- -AGC-UCC-- 301 -GGCCGGU-- -CCACCCCUC CC-----GGG GU-------- ----CCUGCG GCCCGGCC-- 361 ---------- ---------- ---------- ---------- ---------- -GCCCGCCC- 421 --------GA AC-------C CCCCGCGA-- CCCG--CCUG --------AG GCCACGGCCG 481 GCCCG-GGGC CUC----UGC G---GAGGUG CCCAUUGCCG CCGCGAAGAG UUAGGCUCUG 541 UCAGCCG--C GGG-AUCCGC GCGGG----C C-------GG GCCGCGGC-- ---------- 601 ---------- ---------- CGGACGCCGA U--CCGCAGG -GACAGCAA- CG-----GAA 661 C-CG-GCCCC -------UUC GCCCUGUGCG CUUCCC-GGA G-CUGUGGGA UGAGCAC--C 721 C-GGGGU-CG -GCUCCUACA GUU // LOCUS Vole 740 bp DEFINITION Vole 740 bp TITLE Microtus ochrogaster ORIGIN 1 ---------- ---------- ---------- -GA-CGCGC- GCCUC---UU CUAACCCUAA 61 AAACUG-G-- AGCUGUAGGU -GUUGC--UC UUU--CAGCG U--------- ---------- 121 ---------C GCCCGCUGUU UUUCU--CGC UGGCUUU-CA GCGGGCC--A G-AAAGUUCA 181 G--ACCUCUC AGCA-GAUCG UCGCGUCGUU C--------- ---------- ---------- 241 ---------- ---------- -UCAACCA-- ---CA----- AAAAAUGCC- -AGCGCAAA- 301 -GCGCGUC-- -A---GCCU- -------AGA AC-------- ----CUUGCG GCCCCG---- 361 ---------- ---------- ---------- ---------- ---------- -GGCCGCCC- 421 ---------- AG-------- CCCCG-CA-- CCCG--CCUU G-------AG GCCGCGGUUG 481 GCCU--GGAG UUC----UCC G---GA---C UCCGCUGCCG CCGCGAAGAG UUCGUCUCUG 541 UCAGCCG--C GGA-GUAU-C AGGGG----C UG------GG GCCAGGCC-- ---------- 601 ---------- ---------- CGGAC-AGCG ---UCGCAAG -UACAGUAA- CG-----GAG 661 C-UG-GUCCU ---------U GUUCGGUGG- CUUCCC-UGA G-CUGUAGGA AGUACAC--C 721 C-AGAGCUCG -GCUCCUACA ACC // LOCUS Hamster 740 bp DEFINITION Hamster 740 bp TITLE Cricetulus griseus ORIGIN 1 ---------- ---------- ---------- ---------- --------GU CUAACCCUGA 61 AUUCUGAG-- AGCUGUGGGU -ACUGU--GC UUU--CGUCU C--------- ---------- 121 ---------C GCCCGCUGUU UUUCU--CGC UGACUUC-CA GCGGGCG--G G-AAAGUCCA 181 G--ACCUG-C AGCG-GGCCA UCGCGCGUUU U--------- ---------- ---------- 241 ---------- ---------- -CCA-CCA-- ---CAA---- AAAAAUGUC- -AGCGCUGG- 301 -GCUC-AU-- -GU--GCCU- -------GGA GC-------- ----CUUGCG GCC------- 361 ---------- ---------- ---------- ---------- ---------- -GGCCGCCC- 421 ---------- AG-------- CCCCG-CA-- CCCG--CCUG --------AG GCCGCGGUCG 481 GCCU--GGAG -UC----CUC G---GG---C UCCGCUGCCG CCGCGAAGAG CUAGACUCUG 541 UCAGCCG--C GGG-GCGU-C AGGGG----C UG------GG GCGAGCCC-- ---------- 601 ---------- ---------- CGGC--AGCG ---CCGCAAG -CAGAGAAA- CG-----GAG 661 C-UG-GUCCC --------GU GAACGGUGA- CUUCCC-UGA G-UUGUGGGA AAUGCAC--C 721 A-GGAACUCG -GUUCCCACA ACC // LOCUS Mouse 740 bp DEFINITION Mouse 740 bp TITLE Mus musculus ORIGIN 1 ---------- ---------- ---------- ---------- --------AC CUAACCCUGA 61 UUUUCAUU-- AGCUGUGGGU -UCUGG--UC UUU-UGUUCU C--------- ---------- 121 ---------C GCCCGCUGUU UUUCU--CGC UGACUUC-CA GCGGGCC-AG G-AAAGUCCA 181 G--ACCUG-C AGCG-GGCCA CCGCGCGUUC C--------- ---------- ---------- 241 ---------- ---------- -CGAGCCU-- ---CAAAA-- ACAAACGUC- -AGCGCAGGA 301 -GCUCCAG-- -GUUCGCCG- -------GGA GC-------- ----UCCGCG GCGCCG---- 361 ---------- ---------- ---------- ---------- ---------- -GGCCGCCC- 421 ---------- AG-------- UCCCG-UA-- CCCG--CCUA C-------AG GCCGCGGCCG 481 GCCU--GGGG -UC----UUA G---GA---C UCCGCUGCCG CCGCGAAGAG CUCGCCUCUG 541 UCAGCCG--C GGG-GCGC-C GGGGG----C UG------GG GCCAGGCC-- ---------- 601 ---------- ---------- -GGGCGAGCG ---CCGCGAG -GACAGGAA- UG-----GAA 661 C-UG-GUCCC -------CGU GUUCGGUGU- CUUACC-UGA G-CUGUGGGA AGUGCAC--C 721 C-GGAACUCG -GUUCUCACA ACC // LOCUS Mouse 740 bp DEFINITION Mouse 740 bp TITLE Mus spretus ORIGIN 1 ---------- ---------- ---------- ---------- --------AC CUAACCCUGA 61 UUUUCAUU-- AGCUGUGGGU -UCUGG--UC UUU-UGUUCU U--------- ---------- 121 ---------C GCCCGCUGUU UUUCU--CGC UGACUUC-CA GCGGACC-AG U-AAAGUCCA 181 G--ACCUG-C AGCG-GGCCA CCGCGCGUUC C--------- ---------- ---------- 241 ---------- ---------- -CGAGCCU-- ---CAAAA-- ACAAACGUC- -AGCGCAGGA 301 -GCUUCAG-- -GUUCGCCG- -------GGA GC-------- ----UCCGCG GCGUCG---- 361 ---------- ---------- ---------- ---------- ---------- -GGCCGCCC- 421 ---------- AG-------- UCCCG-UA-- CCCG--CCUA C-------AG GCCGCGGCCG 481 GCCU--GGGG -UC----UUA G---GA---C UCCGCUGCCG CCGCGAAGAG CUCGCCUCUG 541 UCAGCCG--C GGG-GCGC-C GGGGG----C UG------GG GCCAGGCC-- ---------- 601 ---------- ---------- -GGGCGAGCG ---CCGCGAG -GACAGGAA- UG-----GAA 661 C-UG-GUCCC -------CGU GUUUGGUGU- CUUACC-UGA G-CUGUGGGA AGUGCAC--C 721 C-GGAACUCG -GUUCUCACA ACC // LOCUS Mouse 740 bp DEFINITION Mouse 740 bp TITLE Mus musculus castaneus ORIGIN 1 ---------- ---------- ---------- ---------- --------AC CUAACCCUGA 61 UUUUCAUU-- AGCUGUGGGU -UCUGG--UC UUU-UGUUCU C--------- ---------- 121 ---------C GCCCGCUGUU UUUCU--CGC UGACUUC-CA GCGGGCC-AG G-AAAGUCCA 181 G--ACCUG-C AGCG-GGCCA CCGCGCGUUC C--------- ---------- ---------- 241 ---------- ---------- -CGAGCCU-- ---CAAAA-- ACAAACGUC- -AGCGCAGGA 301 -GCUCCAG-- -GUUCGCCG- -------GGA GC-------- ----UCCGCG GCGCCG---- 361 ---------- ---------- ---------- ---------- ---------- -GGCCGCCC- 421 ---------- AG-------- UCCCG-UA-- CCCG--CCUA C-------AG GCCGCGGCCG 481 GCCU--GGGG -UC----UUA G---GA---C UCCGCUGCCG CCGCGAAGAG CUCGCCUCUG 541 UCAGCCG--C GGG-GCGC-C GGGGG----C UG------GG GCCAGGCC-- ---------- 601 ---------- ---------- -GGGCGAGCG ---CCGCGAG -GACAGGAA- UG-----GAA 661 C-UG-GUCCC -------CGU GUUCGGUGU- CUUACC-UGA G-CUGUGGGA AGUGCAC--C 721 C-GGAACUCG -GUUCUCACA ACC // LOCUS Rat 740 bp DEFINITION Rat 740 bp TITLE Rattus norvegicus ORIGIN 1 ---------- ---------- ---------- ---------- --------GU CUAACCCUAU 61 UGUU-AU--- AGCUGUGGGU -UCUGU--UC UUU-UGUUCU C--------- ---------- 121 ---------C GCCCGCUGUU UUUCU--CGC UGACUUU-CA GCGGGCC-UG G-AAAGUUCA 181 G--ACCUG-C AGCG-GGUCA CCGCGCAUUC U--------- ---------- ---------- 241 ---------- ---------- -GGAACCU-- ---CA----- AAAAAUGUC- -AGCGUAGGA 301 -GCUC-UG-- -GU--GCC-- -------AGA GC-------- ----UCCGCG GCGCUG---- 361 ---------- ---------- ---------- ---------- ---------- -GGCCGCCC- 421 ---------- AG-------- CCCGG-UA-- --CC--CGCC UGG-----AG GCCGCGGACG 481 GCCU--GGGG -UC----UUA G---AA---C UCCGCUGCCG CCGUGAAGAG CUAGUCUCUG 541 UUAGCUA--C GGG-GCAC-C GGGCG----C UG------GG GUCAGGCC-- ---------- 601 ---------- ---------- -GGGAGAGCG ---CCGCAAG -GACAGUAA- CG-----GAA 661 C-UG-GUCCC -------UGA GUUCGGUGG- CUUUCC-UGA G-AUGUGGGA AGUGCAC--C 721 U-GGAACUCA -GUUCCUACA ACC // LOCUS Ferret 740 bp DEFINITION Ferret 740 bp TITLE Mustela putorius furo ORIGIN 1 GGGUUGCGGA GGGUGGGCUC GGGAG--GGG UGGCGGUCA- UUUUCU--GU CUAACCCUAA 61 CUGAAACG-- GGCG-UAGGC -GCUGC--GC UUU-UGUUCC C--------- ---------- 121 ---------C GCACGCUGUU UUUCU--CGC UGACUUU-CA GCGGGCG--G A-AAAGCCUU 181 G--GCCUA-C UGCC-ACACA CCAUCCAGUU U--------- ---------- ---------- 241 ---------- ---------- -GGAGCAAA- ---CA----- AAAAAUGUC- -AGC-GGC-- 301 -UGG-CC-UG CUCGCCCCUC CC-----GGG AG-------- ----CCUGCG GCGACUC--- 361 ---------- ---------- ---------- ---------- ---------- -GCCCGCUU- 421 ---------- AG-------C CCCCG-CA-- UCCC--GCCU GG------AG GCCGCGGUCG 481 GCCCG-GGGC UUC----UCC G---GAGGCA CCCAUUGCCG UCGCGAAGAG UUGGGCUCUG 541 UCAGCCG--C GGG-ACCCUU GGGGG----C CAA-----GG GCG-AGGC-- ---------- 601 ---------- ---------- -----UCUGG ---CCGCAGG -GAGAGAAA- CG-----GAG 661 C-GG-GUCCC -------CUC GCGCGGUGCG CUUCCC-UGA G-CUGUGGGA CUUGCAC--C 721 C-GGGACUAG -GCUCACACA CAC // LOCUS Raccoon 740 bp DEFINITION Raccoon 740 bp TITLE Procyon lotor ORIGIN 1 GGGUUGCGGA GGGUGGGCCU GGGAG--GGG UGGCGGUCG- UUUUAU--GU CUAACCCUAA 61 CUGAGAAG-- GGCA-UAGGC -GCUGC--GC UUU-UGUUCC C--------- ---------- 121 ---------C GCACGCUGUU UUUCU--CGC UGACUUU-CA GCGGGCG--G A-AAAGCCUC 181 G--GCCUA-C UGCC-AUCCA CCAUCCAGUU U--------- ---------- ---------- 241 ---------- ---------- -GGAGCAAA- ---CA----- AAAAAUGUC- -AGC-CGC-- 301 -CGG-CC-UG CUCGCCCCUC CC-----GGG AU-------- ----CCUGCG GUGGCUC--- 361 ---------- ---------- ---------- ---------- ---------- -GCCCGCUU- 421 ---------- AG-------C CCCCGCGU-- CCCG--CCUG G-------AG GCCGCGGUCG 481 GCCCG-GGGC UUC----UCC G---GAGGCA CCCAUUGCCG UCGCGAAGAG UUGGGCUCUG 541 UCAGCCG--C GGG-ACCUUU GGGGG----C CAA-----GG GCG-AGGC-- ---------- 601 ---------- ---------- -----UCUGG ---CCGCAGG -GAGAGAAAA CG-----GAG 661 C-GG-GUCCC -------CUU GCGCGGUGCG CUUCCC-UGA G-CUGUGGGA CUUGCAC--C 721 C-GGGACUAG -GCUCACACA CAU // LOCUS Cat 740 bp DEFINITION Cat 740 bp TITLE Felis catus ORIGIN 1 GGGUUGUGGA GGGUGGGCCU GGGAG--GGG AAGCGGUCA- GUUUUU--GU CUAACCCUAA 61 CUGAGAAG-- GGCG-UAGGC -GCCGC--GC UUU-UGUUUC C--------- ---------- 121 ---------C GCACGCUGUU UUUUU--CGC UGACUUU-CA GCGGGCG--G A-AAAGCCUC 181 G--GCCUA-C CGCC-GUCCA CCGUACAGUU U--------- ---------- ---------- 241 ---------- ---------- -GGAGCAAA- ---CA----- AAAAAUGUC- -AGC-UGC-- 301 -UGA-CU-UG CUCGCCCCUC CC-----AGG AC-------- ----CCUGCG GUGGCUC--- 361 ---------- ---------- ---------- ---------- ---------- -GCCUCCUU- 421 ---------- AG-------C CCCCGCGU-- CCCG--CCUA G-------AG GCCGCGGUCG 481 GCCCG-GGGC UUC----UCC G---GAGGCA CCCAUUGCCG UCGCGAAGAG UUGGGCUCUG 541 UCAGCCG--C GGG-UCCCUU GGGGG--GGC CGA-----GG GCG-AGGC-- ---------- 601 ---------- ---------- -----UCUGA ---CCGCAGG -GAGAGAAA- CGG----GAG 661 C-AG-GUCCC -------CGC GCGCGGUGCG CUUCCC-UGA G-CUGUGGGA CUUGCAC--C 721 C-GGGACUGG -GCUCAGACA CAU // LOCUS Cow 740 bp DEFINITION Cow 740 bp TITLE Bos taurus ORIGIN 1 GGGUUGCGGA GGGUGGGCCC CGGGU--UGG UGGCAGCCA- UUUCUC--AU CUAACCCUAA 61 UUGAGACA-- GGCG-UAGGC -GCUGU--GC UUU-UGGUUA C--------- ---------- 121 ---------C GCGCGCUGUU UUUCU--CGC UGACUUU-CA GCGGGCG--G A-AAAGCCUC 181 G--GCCUA-C CGCC-AUCCA CCAUCCAGUC U--------- ---------- ---------- 241 ---------- ---------- -GCAACAAA- ---CA----- AAAAAUGUC- -AGC-CGC-- 301 -UGG-CU-CG CUCACCUCUC CC-----GGG AA-------- ----CCUGCG GUGGUCC--- 361 ---------- ---------- ---------- ---------- ---------- -GCCCGCCC- 421 ---------- AG-------C CCCAGUGC-- CCCG--CCUG --------AG GCCGCAGUCG 481 GCCCG-GUGC UUC----UCC G---GAGGUG UCCAUUGCCG CCGUGAAGAG UUGGGCUCUG 541 UCAGCCG--C GGG-UCGCUC GGUGG---GC CGA-----GG -CA-UGGC-- ---------- 601 ---------- ---------- -----UGUAA ---CCGCAGG -GAAAGGAA- CG-----GAG 661 UGGG-GUCCC -------CGC GCGCGGUGCG CUUCCC-UGA G-CUGUGGGA CUUGCAC--C 721 C-GGGACUCG -GCUCAGACA UCU // LOCUS Pig 740 bp DEFINITION Pig 740 bp TITLE Sus scrofa ORIGIN 1 GGGUUGCGGA GGGUGGGCCC AGGAG--CGG UGGCGGCCA- UUUUUUAAGU CUAACCCUAA 61 CUGAAAGA-- GGCG-UAGGC -GCUGC--GC UUU-UGCUUC A--------- ---------- 121 ---------C GCGCGCUGUU UUUCU--CGC UGACUUU-CA GCGGGCG--G A-AAAGCCUC 181 G--GCCUA-C CGCC-AUCCA CCAUCCAGUC U--------- ---------- ---------- 241 ---------- ---------- -GAAACAAA- ---CA----- AAAAAUGUC- -AGC-CUC-- 301 -UGG-CU-CG CUCACUGCUC CC-----GGG AA-------- ----CCUGCG GUGGUUC--- 361 ---------- ---------- ---------- ---------- ---------- -GCCCGCCC- 421 ---------- AG-------C CCCCGCGC-- CCCG--CCUG --------AG GCCGCGGUCG 481 GCCCG-GGGC UUC----UCC G---GAGGCG CCCAUUGCCG CCGCGAAGAG UUGGGCUCUG 541 UCAGCCG--C GGG-UCCCUC GGGGG----C CAA-----GG -CG-AGGC-- ---------- 601 ---------- ---------- -----UCUGA ---CCGCAGG -GAAAGGAA- CG-----GAG 661 U-UG-GUCCC -------CGC GCGCUGUGCG CUUCCC-UAA G-CUGUGGGC UGUGCAC--C 721 U-GGGACUCG -GCUCAGACA CUU // LOCUS Shrew 740 bp DEFINITION Shrew 740 bp TITLE Suncus murinus ORIGIN 1 ---------- ---GGGUUGC GGGAGCUGCG AGC-GGCCG- UCUC----GU CUAACCCUAA 61 A-GAGAAA-- GGCG-UAGGU -GCUUG--GC CUU-GGCGAC U--------- ---------- 121 ---------C GCCCGCUGUU UUU-U--GGC UGGCUUU-CA GCGGGUG--A A-GAGGCCCA 181 AG-ACCUA-C CGCC-ACCCA CCGUCUAGUG UCUUAAGGGC ACAAAGUCCU GCCCGCCACC 241 CUUCGA---- ---------- -GGAGCGAAA ---CCC---- AAAAAAGUC- -AGC-CCC-- 301 -UGGCCGCCU CUCGC-CCUC UC-----GC- AA-------- ----CCCGCC U--------- 361 ---------- ---------- ---------- ---------- ---------- -CCG-UCCC- 421 ---------- AG-------- CCUCCAUC-- CCCG--CCCC --------AG GCCGCGGUCG 481 GUCCG--GGC UUC----UUC G---GAAGUC CC-GUUGCCG UCGCGAAGAG UUCGCCUCUG 541 UCAGCCG--C GGG-GCU--U GGGG-----C CAG-----GG A----CGG-- ---------- 601 ---------- ---------- --GACCCUGU ---CCGCAGG -GAGAGAAAC UG-----GAG 661 C-CG-GGCCC ---------U CCACGGUGC- C-UCCC-CGA G-CUGUGGGA UCUGCAC--C 721 C-GGGACUCG -AACCCUACA CUU // LOCUS Horse 740 bp DEFINITION Horse 740 bp TITLE Equus caballus ORIGIN 1 GGGUGGGGGA GAGUGGGUCU GGGCG--GGG CGGCGGUCA- CGUUUU--GU CUAACCCUAA 61 CUGAGCUG-- GGCG-GAGGC -GCCGC--GC UUU-UGCUCC C--------- ---------- 121 ---------C GCGCGCUGUU UUUCU--CGC UGACUUU-CA GCGGGCG--G A-AAAGCCUC 181 G--GUCUA-C CGCC-ACUUA CCAUCCAGUC U--------- ---------- ---------- 241 ---------- ---------- -GGAGUAAA- ---CA----- AAAAAUGUC- -AGC-CGC-- 301 -UGG-CU-CG CUCGCCCCUC CC-----GGG AC-------- ----CCUGCG ACGGCUC--- 361 ---------- ---------- ---------- ---------- ---------- -GCCCGCCC- 421 ---------- AG-------C CCCCGCGC-- CCCG--CCUG G-------AG GCCGCGGUCG 481 GCCCG-GGGC UUC----UCC G---GAGGCG CCCAAUGCCG CCGCGAAGAG UUGGGCUCUG 541 UCAGCCG--C GGG-UGCCUC GGGGG----C CAG-----GG ACG-AGGC-- ---------- 601 ---------- ---------- -----UCUGG ---CCGCAGG -GAGAGGAA- CG-----GAG 661 C-GG-GUCCC -------CGC GCGCGGUGCG CUUCCC-UGA G-CUGUGGGA CGUGCAC--C 721 C-GGGACUCG -GCUCAAACA CGU // LOCUS Armadilo 740 bp DEFINITION Armadilo 740 bp TITLE Dasypus novemcinctus ORIGIN 1 GGGUUGCGGA GGGAGGGCCC GGGAG--GGG UGAGCGUCC- AUUAUC--GU CUAACCCUAA 61 CUGAGAUG-- GGCG-UAGGC -GCCGC--GC UUU-UGCUUC C--------- ---------- 121 ---------C GCGCGCUGUU UUUCU--CGC UGACUUU-CA GCGGGCG--G A-AAAGCCUC 181 G--GCCUA-C UGCC-GUCUA CUGUCGUAUC U--------- ---------- ---------- 241 ---------- ---------- -GGAGCAAA- ---CA----- AAAAAUGUC- -AGC-CGC-- 301 -UGG-UC-CG CUCGCCCCAU CC-----GGG AA-------- ----CCUGCG GUGGCUC--- 361 ---------- ---------- ---------- ---------- ---------- -GUCCGCCC- 421 ---------- UG-------C CCCCGCGC-- UCCG--CCUA G-------AG GCCGCGGUCC 481 GCCCG-GGGC UUC----UCC G---GAGGCA CCCAAUGCAG CCGCGAAGAG UUAGGCUCUG 541 UCAGCCG--C GGA-UCCCGC GGGGG----C CAA-----GG GUG-AGGC-- ---------- 601 ---------- ------UUAG GCC--GCGGG ---CCGCAGG -AAGAAAAA- CC-----GAG 661 C-GA-GUUCU -------CAC GCGCGGUGCG CUUCCC-UGA G-CUGUGGGU CGUGCGC--C 721 U-GGGACUCG -GCUCAGACA CGU // LOCUS Quoll 740 bp DEFINITION Quoll 740 bp TITLE Dasyurus hallucatus ORIGIN 1 ---GUGCGGA CGGGCUGCGU GGGCGGGUCG GUCCGUCCU- GGCAC---AU CUAACCCUAA 61 AUGCGCGC-- UGGU-UGAAG -UGGCU--UC UCC-UGGGCG AU-------- ---------- 121 ---------C GCUCGCUGUU UUUGU--GGC UGGCUUU-CA GCGGGCU-GG A-GGAGCCGG 181 G--AGCGG-- AGGCGGAGGA CCGAG----- ---------- ---------- ---------- 241 ---------- ---------- ---------- --CC------ AAAAACGUC- -AGC-CG--- 301 -AGGCCGG-- -GCGGCCC-- ---------- CG-------- ----CUCGUG GC-CCGUCCG 361 CACUGUCCGG GCCAGGCCCC GGCCCGAACC CCCUGGAGAC AACUCCCGCA GGGUCUGCGC 421 UGCGCCGCGG AG-------- CCCCG-GCUG CCCACGUAG- --------AG GCGGCGG-CC 481 GUCUCGGGGC CCCUG--CGU G--CGGGGCG CCCACUGCGG CCGCCAAGAG CUCGUCUCUG 541 UCAGCCU--C GGGUGCACGU GGGCC---CG CGGUCGAGCC CUAAGGCC-- ---------- 601 -----GGGCG UGGGG-CUG- ---------- GGGUCGCAGG -GAGAGUAAC CGU----GAG 661 CCGGCGCCC- -------AGC CUUCAGGGCG C-UCCCUCGA G-CUAUGGGA GCUGCCC--C 721 C--GGGCACG -GCUCGGACA CCC // LOCUS Elephant 740 bp DEFINITION Elephant 740 bp TITLE Elephas maximus ORIGIN 1 GGGUUGAGGA GGGUACGCCC GGGA---GGG CGGUGGUCU- GUUCUG--UU CUAACCCUAA 61 CUGAUAAG-- GGCG-UAGGC -GCCGU--GC UUU-UGUUCC C--------- ---------- 121 ---------C GCGCGUUGUU UUUCU--CGC UGACUUU-CA GCGGGCG-GG A-AAAGCCUC 181 G--GUCUA-C CGCC-GUCUA CCG-AUAGCC U--------- ---------- ---------- 241 ---------- ---------- -GGAGCAAA- ---CAA---- AAAAAUGUC- -AGC-CGC-- 301 -CGG-CC--G CUCGCCCCUC CC-----GGG AA-------- ----CCUGCA GUGGCUC--- 361 ---------- ---------- ---------- ---------- ---------- -GCCCGCCC- 421 ---------- AG-------- CCCCGCUC-- CCCG--CCUG G-------AG GCCGCGGUCG 481 GCCUG-GGGC UUC----UCC G---GAGGUU CCCGCUGCCG CCGCGAAGAG UUGGGCUCUG 541 UCAGCCG--C GGG-UCCCGC GGGAA----C CAA-----GG GCG-AGGC-- ---------- 601 ---------- ------UGGG GCC-UCCUGA ---ACGCAGG -GAGAGAAA- CG-----GAG 661 C--G-GUUCC -------CCG CGUGCGUGCG CUUCCC-UGA G-UUGUGGGA UGUGCGC--U 721 C-GGGGCUCA -GCUCCGACA GGU // LOCUS Manatee 740 bp DEFINITION Manatee 740 bp TITLE Trichechus manatus ORIGIN 1 GGGUUGAGGA UGGCGCCCCC GGGUC--GGG CAGUGGUCU- UUUUUG--UU CUAACCCUAA 61 CUGGCAAG-- GGCG-UAGGU -GCUGU--GC UUU-UGUUCC C--------- ---------- 121 ---------C GCGCGUUGUU UUUCU--CGC UGACUUU-CA GCGGGCG-GG A-AAAGCCCU 181 G--GCCUA-C CGCC-GUCUA CCG-AUAGUU U--------- ---------- ---------- 241 ---------- ---------- -GGAGCAAA- ---CAA---- AAAAAUGUC- -AGC-CGC-- 301 -UGG-CC--G CUCACCCCUC CC-----GGG AA-------- ----CCUGUG GUGGCUC--- 361 ---------- ---------- ---------- ---------- ---------- -GCCCGCCC- 421 ---------- AG-------- CCCCGCGC-- CCCG--CCUG G-------AG GCCGCGGUCG 481 GCCUG-GGGC UUC----UCC G---GAGGUU CCCAUUGCCG CCGCGAAGAG UUAGGCUCUG 541 UCAGCCG--C GGG-UCCUGC GGGAA----C CAA-----GG GCG-AGGC-- ---------- 601 ---------- ------UUAG GCC-UCCUGA ---ACGCAGG -GAGAGAAA- UG-----GAG 661 C--G-AUUCC -------CCG AGUACGUGUG CUUCCC-UGA G-UUGUGGGA UGUGCGU--C 721 C-GGGACUCA -GCUCCGACA GGU // LOCUS Chick 740 bp DEFINITION Chick 740 bp TITLE Gallus gallus ORIGIN 1 ---------- ------GCGU -GGCGGGUGG --AAGGCUC- CGCUGU--GC CUAACCCUAA 61 UCGGGGGAAU UGAUGGUGCU GUCGCCGCGC UCC-CUCCGC C--------- ---------- 121 ---------C GCCCGCUGUU UUACU--CGC UGACUUU-CA GCGGGCG-AG A-GGAGCCGC 181 CCCGGGGGGG AGGCGGGCGG CGGGAGGGGG CCGGGGCGCC GCGGCGGUGG GGGUCGGGGG 241 GGGGAGAGAA AGGGCCGAAA GGGGCUCCGC GGCCAA---- AAAAACGUC- -AGC-GAG-- 301 -GGGUCCG-- -CUCGCCCCG AU-----CCG CC-------- ----CUGGGG U--------- 361 ---------- ---------- ---------- ---------- ---------- ---------- 421 ---------- ---------- ---------C CCCG--CUCG CG------UG GCCGCGGUCG 481 GCC---GGC- -------ACC C--------- GCCAUUGCCG CCGCGAAGAG UUCGCCUCUG 541 UCAGCCU--C GGCG----GC GCGCGGGA-G GUGCGG--CG CGC--GGCCC C--------- 601 ---------- ------GCG- ---------- ---CCCCCAG -CAGAGCAAA CGG----GAG 661 C-GG-CGCC- --CCCGGGGU AACCCCCGCG CUCCCC-UGC G-CCGUGGGG CGCGCGG--A 721 C--GGCGUC- -GCUCCCACA CGC // LOCUS Macaw 740 bp DEFINITION Macaw 740 bp TITLE Anodorhynchus hyacinthinus ORIGIN 1 ---------- ------GCGU -GGCGGAUGG -GGAGGCUC- CAGUCU--CA CUAACCCUAA 61 U--------- ------GGCU GCCGCCGUGC UCC-CCGCAC C--------- ---------- 121 ---------C GUCCGCUGUU UUAUU--CGC UGACUUU-CA GCGGACG-GG G-GGAGCCGC 181 CUGGGGGGGA ---------- ---------- ---------- ---------- ---------- 241 ---------- ---------- AGGGGUUUGC AAUCA----- AAAAACGUC- -AGC-GAC-- 301 -GGGUCUC-- -CCCAGCCCA GC-----CCG CC-------- ----CUGGGG UCUCCGUCCC 361 CCCACGCAGC C--------- ---------- ---------- --------GG GGGCCUGCC- 421 --------GC GGAGG---CU CCCUC----C GCCG--CACU UCACGG--AG GCCGCGGUCG 481 GCC---GGU- -------GUC C--------- GCCACUGCCG CCGCGAAGAG UUCGUCUCUG 541 UCAGCCU--C GGCG----GC GGUGGGGA-G CGAGAG--GG CUC--GUCCC C--------- 601 ---------- ------GCGC CGGGG----- ---ACCCCAG -CAGAGCAAA ACG----GAG 661 C-GG-CGUC- --CUCGGCAC AGCCGCCGCG CUUCCC-UCA A-CCGUGGGA UGCGCGG--A 721 C--GGCGCC- -GCUUCGACA CCC // LOCUS Turtle 740 bp DEFINITION Turtle 740 bp TITLE Chelydra serpentina ORIGIN 1 ---------- ------GCUG CGGCGGCAGG UGGGGGCUC- -AGUCU--UU CUAACCCUAA 61 GCG--AAAUG UGACC----- --------CC UCC-CCGCUG CAGC------ ---------- 121 ---------C GUCCGCUGUU UUACU--CGC UGACUUU-CA GCGGACG-GG G-GGAGCGGG 181 U--------- ---------- ---------- ---------- ---------- ---------- 241 ---------- ---------- --GGAGACGC CAACCA---- AAAAACGUC- -AGC-GAG-- 301 -GGGCCCU-- -CCCCUCCCA CG-----CCG AC-------- ----CUGGGC CUGUGG---- 361 ---------- ---------- ---------- ---------- --------UG GGGCCCGCC- 421 -------AGC GAAGU--CCC CGCCG----C CCCG--CCCC GGUG----AG GCCGCGGUCA 481 GCC---GGC- -------UCG C--------- GCCACUGCUG CCGCGAAGAG UUCGUCUCUG 541 UCAGCCU--C GGGG----GC GGCCGGGG-U GGA-AG--GG CGG--GUCCC ---------- 601 ---------- ------GAGC CCGUC----- ---GGCC-GG -GAGAGCAAA CGU----GAG 661 CGGC-AGCCC C-------UG CGCCACCGCC CUCCCC-UAA G-CUGUGGGG CCCGCGG--U 721 CGGGGCUGC- -GCUCAGACA CGC // LOCUS Toad 740 bp DEFINITION Toad 740 bp TITLE Bombina japonica ORIGIN 1 ---------- -GUUUAAUUA GAGGGAUUGG AAG-GUUCC- GCUUA---UG CUAACCCUAA 61 UAUUGGGGGU CUGUUGAAAA --------CC UCU-UUAAGA UA-------- ---------- 121 ---------U GCGUGUUGUU UUAUU--GGC UGACUUU-CA GCGCGCA-UU G-AGAGGAGU 181 U--------- ---------- ---------- ---------- ---------- ---------- 241 ---------- ---------- --GCUGCCCA GGACUA---- AAAAAUGUC- -AGC-UG--- 301 -GGAGUCCU- -UCCUC-UCC CU-----UAU U--------- ----UCUGCC UCACAACCU- 361 GGA------- ---------- ---------- ---------- ---------- --CUCUUUA- 421 --------UU UA-------G CGGUG----- CCCC-AUUUG UCG-----AG GCCGCAGUCA 481 GUC------- ---UUGUUCU UAUACG---- ----CUGCUG UUGCGAAGAG UUCGUCUCUG 541 UCAGCCUCCG GGG------C AACGC---CU UGAAUU--UG GAG--AG--- ---------- 601 ---------- ------CCUG GGAAUGUAAC AAGGGGUAGG -GAAAAUAAC GA-----GAG 661 CUGA-GUUG- ------GCUU CUCCUGUGCU G-UUCC-UGA G-CUGUGGAA CUUGCAA--U 721 CG-CAGUC-G -GCUCUGACA CUU // LOCUS Xenopus 740 bp DEFINITION Xenopus 740 bp TITLE Xenopus laevis ORIGIN 1 GAAUCAGCGU UUAAAGCUCA AUGUGGAC-G GAGGUCUCU- GUUU----CG CUAACCCUAA 61 UACACUGGCU UCAGGGCGAU G-------GC UCU-UCGCGG CGG------- ---------- 121 ---------U GCCUGUUGUU UUACU--UGC UGACUUU-CA GCGGGCA-CG G-AGAGCAAG 181 C--------- ---------- ---------- ---------- ---------- ---------- 241 ---------- ---------- --GUAGACGA CGACUA---- AAAAACGUC- -AGC-UG--- 301 -GGAGA-CU- -CCUCCGUUC GCACAGCCCG A--------- ----CCUGCU CCAUUGCCCA 361 AGA------- ---------- ---------- ---------- -------GCC CCGGGUUUUC 421 U----CUGUG GAAUGU---A UCAGGCGCU- CCCCGGUCUG UCUGUCUGGG GCCGCGGUCG 481 GCA------- -------UCA U--------- ----CUGCUG UCGCGAAGAG UUCGUCUCUG 541 UUAGCCCUUG GGG----GCC CUGGU----- GCGGAG--UG GAG--AGUCC GGGUCU---- 601 ---------- ------GGG- ---------- ---GGGUCGG -GAGAACAAA AG-----GGG 661 GCGC-GCUGG UGCUCAGGCU CAGUCAUGCU U-UCCC-UUA G-UUGUGGGA UAUGCGU--G 721 UU-CAGCCAG -UCCCCGACA UGU // LOCUS HornedFrog 740 bp DEFINITION HornedFrog 740 bp TITLE Ceratophrys ornata ORIGIN 1 ---------- -------ACA GUGGGAAUAG GAG-GGAGU- CUAUAU--UU CUAACCCUAA 61 UAUACCCGGU --UCAGG--- --------GC UCU-UAUGUG G--------- ---------- 121 ---------C GCUCGUUGUU UUGCC--GGU UGCCUUU-CA GCGGGCG--A A-AGAGCUCA 181 G--------- ---------- ---------- ---------- ---------- ---------- 241 ---------- ---------- --AGAAGCGA GGACCA---- AAAAACGGC- -AGC-CG--- 301 -CGGGCCC-- -UCCUGUUCC CA-----CCA U--------- ----CCCAGC UUUUCCACAC 361 UGC------- ---------- ---------- ---------- ---------- -GCCUGGGU- 421 ---UCUCACU CAA-GUGUUC GGCAG----- CUUC-CACUU ACG-----AG GCCGCGGUCU 481 ACC------- -----GCUGU CAC------- ----UGGUAG UCGCGAAGAG UUCGUCUCUG 541 UCAGCCUUGG GAG------C CGCGG--ACG GAGUAUGAGG UCC--AGU-- ---------- 601 ---------- ------AAUG AG-------- ----AGCAGG GAAGAGUAAA GC-----GAG 661 CCGC-GCUA- -----CUUGU CCUAUCUGCC G-CUCC-UAA G-CUGUGGGG CGUGUAG-GG 721 UA-CACAA-G -GCUCCGACA UUC // LOCUS Bullfrog 740 bp DEFINITION Bullfrog 740 bp TITLE Pyxicephalus adspersus ORIGIN 1 ---------- -------CCA GCGGUAAUAG GAG-AGU-U- CUAUCC--UU CUAACCCUAA 61 UGCACAGACC CCUCGCU--- --------GC UCU-UCA--- ---------- ---------- 121 ---------U GCUCGUUGUU UUUCU--CGC UGACUUU-CA GCGGGCG--A A-AGAGCAAU 181 G--------- ---------- ---------- ---------- ---------- ---------- 241 ---------- ---------- --GAAGCUCA GGACUA---- AAAAACGUC- -AGC-CG--- 301 -UAGGCUU-- -UCCUAUAGC CG-----CAG G--------- ----CCUGCC UGU-CAGUG- 361 UGC------- ---------- ---------- ---------- ---------- -GCGGCCUC- 421 ------UGCU CGCAAUGU-C CGCAG----- CGCC-UUCCU AUG-----AG GCCGCAGUCU 481 GCC------- -----AAUAC CCC------- ----GGGCAG CCGCGAAGAG CUCGUCUCUG 541 UCAGCCUUUG GCG------C UGCGG---CG GAGUGGGGGA GGC--CGC-- ---------- 601 ---------- ------UGAU ---------- ----GGCAGC UGAGAAUAAA GC-----GAG 661 CCCA-GCUG- ---CCCCGCU CUGUUCCACU G-CCCC-UGA G-CUGUGGGG UUGGUGA-AU 721 UG-CAGCAUG -GCUCCGACA ACU // LOCUS Dermophis 740 bp DEFINITION Dermophis 740 bp TITLE Dermophis mexicanus ORIGIN 1 ---------- -----CUCUC UCCGGAGAGG GGCGGUUUC- UCUGUC--UU CUAACCCUAA 61 UGCGGUGCUU CGGCAGAA-- --------GC UCUCCACUGC GUA------- ---------- 121 ---------C GCUCACUGUU UUUCU--AGC UAACUUU-CA GUGAGCA-GG G-AGAGCGAA 181 GUC------- ---------- ---------- ---------- ---------- ---------- 241 ---------- ----CAGUUU C-ACGACAAC GGAGA----- AAAAAUGUU- -AGC-UG--- 301 -GGGAACG-- -UCCCUUUCC CG-----AGA G--------- ----CCCGCG CCGUCCUUUU 361 UCUUCCU--- ---------- ---------- ---------- -------CGG GCCCGUUGG- 421 ------C-AU AGCCCCU--- GGCCU----- CCUC-GCUCU AU------AG GCCGCGGUCA 481 GCUC--GGGC CCC--AGCUC CGGCAGGGGU UCCACUGCUG CCGCGAAGAG UUCGCCUCUG 541 UCAGCCUU-G AGG------U GGCC----GG GAUAGAA-UA GGC--GGGCU CG-------- 601 ---------- ------CGGC AGC------- ---GCGCGGG AAAGAGCAAA U-G--GUGAA 661 CUGG-GUGC- ------CUGU UGGGGUCGC- G-UCCC-UGA A-GAGUGGGA AGUGCGA--U 721 CU-GUGUUCC UGUUCAGACA CAC // LOCUS Herpele 740 bp DEFINITION Herpele 740 bp TITLE Herpele squalostoma ORIGIN 1 ---------- -----UUCUC UCUGGAGCGG GGCGAUUUC- UCUUCC--UU CUAACCCUAA 61 UGCGGUGCUU AGGCGACA-- --------GU UCU---CCGG GUG------- ---------- 121 ---------C GCUCGCUGUU UUUCU--GGC UAACUUU-CA GCGAGCG-GA G-AGAGCGAA 181 GCC------- ---------- ---------- ---------- ---------- ---------- 241 ---------- --GUGGUUUA CGACGAUAGA GGAGA----- AAAAAUGUU- -AGC-UG--- 301 -GGGAACG-- -UCCCUUUCC CG-----AGA G--------- ----CCCGCG CCAUCCU--- 361 -CUUCCU--- ---------- ---------- ---------- -------CGG GCCCAUUGG- 421 ------CGAU AGCCCCC--- GGCCU----C CCUC-GCUCA CC------AG GCCGCGGUCA 481 GCCC--GGGC CCU--GGCUC UGCUAGGGCG UCCAAUGCUG CCGCGAAGAG UUCGUCUCUG 541 AUUGCCUU-G AGG------U AGCC----GG GCUCGAA-UA GGU--GGGCU CG-------- 601 ---------- ------CGGC GAU------- ---GCGCAGG AAAGAGCAAA ACA--GUGAA 661 CUGG-GCGU- ------GUGC UGGGGUCGC- G-UCCC-UGA A-GUGUGGGA UGUGCGA--U 721 CU-GUCCGCU UGUUCAGACA UUG // LOCUS Typhlonectes 740 bp DEFINITION Typhlonectes 740 bp TITLE Typhlonectes natans ORIGIN 1 ---------- -----GUCAU UCCGGAGAGG GGCGUUUUC- UUCUUU--CU CUAACCCUAA 61 UGUAUUGCUU GGGCAGCA-- --------GC UCU---CUCG GUA------- ---------- 121 ---------U GCUCGCUGUU UUGCU--GGC UAACUUU-CA GCGAGCA--G --AGGGCGAA 181 GUC------- ---------- ---------- ---------- ---------- ---------- 241 ---------- ----GAAUUU CG--GACAAG GGAGA----- AAAAAUGUU- -AGC-CG--- 301 -GGGAACG-- -CCCCUUUCC CG-----AAU G--------- ----CCCGUG CCGUCCUUCC 361 UCUCCUC--- ---------- ---------- ---------- -------UGG GCCCGUUGG- 421 ------CGAU AGCCCCC--- GGCCU----C CCUC-GCUCC UU------AG GCCGCGGUCA 481 GUCC--GGGC CCU--UGCUC UGGCAUGAGG UCCAUUGCUG CCGCGAAGAG UUCGUCUCUG 541 UCAGCCUU-G AGG------U GGCC----AG CAUGGAA-UU GGC--GGGCU UG-------- 601 ---------- ------UGGC GGC------- ---GCGCGGG AAAAAGCAAA U-G--GUGAA 661 CUAG-GUGC- ------GUGU UGUGGUCGU- G-UUCC-UGA AGC-GUGGAA UGUGCGA--U 721 CU-GUGCGCU AGUUCAUACA CAC // LOCUS Oryzias latipes 617 bp DEFINITION Oryzias latipes 617 bp TITLE Oryzias latipes ORIGIN 1 ---------- ---------- ---------- -GCGGGGUG- -UUCU---AC CUAACCCUAA 61 UUAGAGGCU- ---------- --------GC CUCGUGUACU UAA------- ---------- 121 ---------C GUAUGCUGUU UUGUUGUUUC UGGCUUU-CA GCAGAC-UAC AUGAGGCGUU 181 G-GGCG---- --UGAAGCUU GAAAAUAUCC GUA------- ---------- ---------- 241 ---------- ---------- ---------- ---CA----- AAAAAAGCC- AGAAAAGA-C 301 UCCCCG---- ---------- ---------- ---------- UCGCGCUCAG ---------- 361 ---------- ---------- ---------- ---------- ---------- ---------- 421 ---------U -UCCCUGCU- --------GG AAAC------ ---------- GCCGCGGUCA 481 GCUCG----- ---------- ---------- ------GCUG CUGCGAAGAG UUCGUCUCUG 541 UU-------G UUUCG----- --------GG GA-------- ---------- ---------- 601 ---------- ---------- ----UUGUCA ACAGCUGAGC --AGAUAAAA A-----UGAG 661 CA--AGGCGA U--------- --CCUGCCG- --AACC-UCA ---UGUGGUC ---CGGUUCG 721 GUA-UCCUAC -GCUCAGACA AAU // LOCUS Gasterosteus aculeatus 617 bp DEFINITION Gasterosteus aculeatus 617 bp TITLE Gasterosteus aculeatus ORIGIN 1 ---------- ---------- ---------- -ACGGAGUG- -UCUC---UU CUAACCCUAA 61 AUACGGAGG- ---------- --------CC CUCCUGUACU CAA------- ---------- 121 ---------C GUUUGCUGUU UU-UU---UC UGGCUUUUCA GUAAAC-UAC GGGAGGGGCU 181 GACGCGACGC UGGGAACGUU UCCGAACGAC AAC------- ---------- ---------- 241 ---------- ---------- ---------- ---CAA---- AAAAAAGCCA AGA--UGACC 301 ACUCCG---- ---------- ---------- ---------- UCGUGUUCAG ---------- 361 ---------- ---------- ---------- ---------- ---------- ---------- 421 ---------U GUCCCGCCU- GAAACACCGC GAAU------ -----UUCCU GCCGUGGUCG 481 GCUUGU---- ---------- ---------- ------GCUG CCGCGAAGAG UUCGUCUCUG 541 UU-------G CUCCGGUGUU CUCAUGGCGG GA-------- ---------- ---------- 601 ---------- ---------- ----CUUGUG AUAACUGAGC --AGAGUAAA AC----UGAG 661 CA--GGGCGA C--------- --UCUCCCA- --GAUCGUUC --CAGUGAUC ---CGGUCAG 721 AAA-GCCCCC -GCUCAAACA CCC // LOCUS Takifugu rubripes 617 bp DEFINITION Takifugu rubripes 617 bp TITLE Takifugu rubripes ORIGIN 1 ---------- ---------- ---------- -ACGGAGUG- -UCUC---UU CUAACCCUAA 61 AUUAUCUCG- ---------- --------GC UCCCUGUACU CGG------- ---------- 121 ---------C GUUUGCUGUU UU--UG--UC UGGCUUU-CA GGAAAC-UAC AGGGAGUCUU 181 G-GACG---- --UCUCGGUU CACGGAU--- ---------- ---------- ---------- 241 ---------- ---------- ---------- ---C------ AAAAAAGCCA AGA--AAAUC 301 ACUCCG---- ---------- ---------- ---------- UCGCGUUCAG ---------- 361 ---------- ---------- ---------- ---------- ---------- ---------- 421 ---------- GUCCCCCCCA GGAACACCGA GAGC------ -------CCU GUUGUGGUCA 481 GUCCG----- ---------- ---------- ------GCUG CCGCAAAGAG UUGGUCUCUG 541 CU-------G CUCCGGUGUC UUG---GCGG GA-------- ---------- ---------- 601 ---------- ---------- ----UCACCA AGGACUGAAC --AGAGAAAC AG----UGAG 661 CG--UGGUGA C--------- --UCUACCG- --GUUC-UUC --CAAUGUCC ---CGGUUAG 721 GAU-ACCCAA -GCUCAAACA CUC // LOCUS Tetraodon nigroviridis 617 bp DEFINITION Tetraodon nigroviridis 617 bp TITLE Tetraodon nigroviridis ORIGIN 1 ---------- ---------- ---------- -GCGGAGUG- -UCUC---UU CUAACCCUAA 61 GUUAAACUA- ---------- --------GC UCCCUGUACU CGG------- ---------- 121 ---------C GUUUGCUGUU UU-UUG--UC UGGCUUU-CA GGAAAC-UAC AGGGAGUCUU 181 G-AGAG---- --UCUCGGUU CACGGAC--- ---------- ---------- ---------- 241 ---------- ---------- ---------- ---C------ AAAAAAGCCA CGA--UGAUC 301 GCUCCG---- ---------- ---------- ---------- UCGUGUUCGG ---------- 361 ---------- ---------- ---------- ---------- ---------- ---------- 421 ---------- -UCCCCCCUC AAAGCACCGC GAGC------ -------CCG GUUGCGGUCA 481 GUCUG----- ---------- ---------- ------GCUG CCGCGAAGAG UUGGUCUCUG 541 CC-------G CUCCGGUGUC UUCAUGUCGG GA-------- ---------- ---------- 601 ---------- ---------- ----UCACCG AGGACCGAAC --AGAGCAAA AC----UGAG 661 CC--UGGUGA C--------- --UCUACCG- --GUUC-UCC --CAGUGUUC ---UGGUAGG 721 AAU-GUCCAA -GCUCAAACA CCC // LOCUS Danio rerio 617 bp DEFINITION Danio rerio 617 bp TITLE Danio rerio ORIGIN 1 ---------- ---------- ---------- -GCAGAGUA- -CUUU---CU CUAACCCUAA 61 CGCUUCUUU- ---------- --------GC UUCCUGUACG GCU------- ---------- 121 ---------U GUAUGCUGUU UUGUC---UU AAGCUUU-CA GCAUAU-UAC AUGAAGCUUU 181 C-CGC----- ------GGUU UCGAUACUU- ---------- ---------- ---------- 241 ---------- ---------- ---------- ---U------ AAAAAAGCUA UAG----AGU 301 ACUCUG---- ---------- ---------- ---------- --GCGCUCGG ---------- 361 ---------- ---------- ---------- ---------- ---------- ---------- 421 ---------U CUCACAGGU- --UUGGCUGU UUGU------ ---------- -ACGCGGACA 481 GUUUG----- ---------- ---------- ------ACUG CCGCCAAGAG UUCGGCUCUG 541 CU-------G CACAUUCGGC AGGUCUGU-G GA-------- ---------- ---------- 601 ---------- ---------- ----CUGCAC AACACUGAGC --AGAUUAAC U-----UGAG 661 CA--UGGCGA A--------- GGUUUGC-G- --GACC-UCA AACACUGAUC ---CUGCAAA 721 UAC-GCCACC -GCUCAGACA UGC // LOCUS Sh.Shark 740 bp DEFINITION Sh.Shark 740 bp TITLE Rhizoprionodon porosus ORIGIN 1 ---------- -----CUCAC AUUGCUGCGG GGUGGAGGC- GUUUUU--AA CUAACCCUAA 61 UGCAGAGUAA GUGGCUGG-- --------GC CUUCCUCACA CUGCCUCCCG CUG------- 121 ---CGUGAAA CCUCGCUGUU UUCUU--GGC UAACUUU-CA GCGAGGUGAG GCAAGGCGGC 181 AAA------- ---------- ---------- ---------- ---------- -----AAAAA 241 GUUGGGAG-- ---------- CAGCAACGGC AAGCAAA--- AAAAAAGUUC CAGC-CGAG- 301 -GCCUCC--U CA-CCACGCG GCCUGGGUCU GAGGGUAACA UGGCCCUGCG GGAGAGAGCC 361 AACACGG--- ------GGGG GCCCCGGUCC GGCUAACAGG GCAGGAG--- -GUCGGCCC- 421 -----CAAUU GCCU--CA-- GGCCC----- AGCC--ACUC C-------GG GCCGCGAUCA 481 GCCC--GGGC UUU---CCCU ACUUU-GGGG CCCAAUGCUG UCGCGAAGAG UUCGGCUCUG 541 UCAGCCC--G GCU------G GGUC------ CGGGUGG-GG GCC--GGCAC AGAGGGACAC 601 ACCGGGCCGG GGCGCCGAGG AUAGCUACCG C--CCGCAGG -GAUAGUAAA UAUCCGUGAC 661 CAGU-GGC-- ------CUCG GUGGCUGCGU C-UCCC-GGA G-CAAUGGGA CC-CGCAAGG 721 CU--GCCCU- -GGUCAUACA CGC // LOCUS DogfishShark 740 bp DEFINITION DogfishShark 740 bp TITLE Mustelus canis ORIGIN 1 ---------- -----CUCAC AUUGCUGCGG GGUGGAGGC- GAUUUU--AA CUAACCCUAA 61 UGCAGAGUAA GUGGCUGG-- --------GC CUUCCUCACA CUGCCUCCCG CUG------- 121 ---CGCGAAA CCUCGCUGUU UUCUU--GGC UAACUUU-CA GCGAGGUGAG GAGAGGCGGC 181 AAA------- ---------- ---------- ---------- ---------- --AAAAAAAG 241 GUUGGGAG-- ---------- CAGCAGCGGC AAACAAAA-- AAAAAAGUUC CAGC-CGAG- 301 -GCCUCC--U CACCCCCGCG GCCUGGGUCU GAGGGUAACA CGGCCCUGCG GGAGAGAGGC 361 AACACG---- ------GGGG CCCCCGGUCC GGCGAACAGG GCAGGAG--- -GUCGGUCC- 421 -----CAAUC GCCUCACA-- GGCCC----- AGCC--ACUC C-------GG GCCGCGGUCA 481 GCCCG-GGGC UUUCCCCCCC ACCAUGGGGG CCCAAUGCUG CCGCGAAGAG UUCGGCUCUG 541 UCAGCCC--G GCU------G GGCC------ AGGGUGG-GG GCC--GGCAC AGAGGGACAC 601 ACCGGGCCGG GGCGCCGGGG AUAGCUACCG C--CCGCAGG -GAUAGCAAA UAUCCGUGAC 661 CAGU-GGU-- ------CUCG GUGGCUGCGU C-UCCC-GGA G-CAAUGGGA CC-CGCAAGG 721 CU--GCCCU- -GGUCAUACA CAU // LOCUS Stingray 740 bp DEFINITION Stingray 740 bp TITLE Dasyatis sabina ORIGIN 1 ---------- ------GUGU CCAGCUGCGG GG--GAGACA GUGUCGCUCU CUAACCCUAA 61 UGUGGGGGCA A-CGCGGG-- --------CC CUU-UGUUUA AAG--UCCCG CUGU------ 121 ---CGGGAGC CCUCGCUGUU UUCUU--GGC UAACUUU-CA GCGAUGG-CG A-AAGGGCCC 181 AGC------- ---------- ---------- ---------- ---------- ------AAAG 241 GUUGGGAAGC GUGAUUUAUU GUUGGUGGGC AGAGAG---- AAAAAAGUUU AAGC-CGCG- 301 -GCCUCC--U C--CCCGGCG GCCCAGGACC C--------- ----CCUGUU -GCAACGUGC 361 GGAAUGGCG- ---------- ---------- ---------- ---------G CCUCGGCCC- 421 -----CCCU- -GCU-GCA-- CGCCC----- AGCC--GUUU --------AG GCCGCGGUCA 481 GCGC--CGGU UUC-CACGCC AGUGU-GGGG CUUGAUGCUG UCGCGAAGAG UUCGUCUCUG 541 UUAGCCU--G GCA------G GGUG----UG CUACGCA-GG GUC--GGGGU ---------- 601 ---------- ------GCGG AG-------- ----GGCAGG -GAGAUUAAA UAG-CUUGAC 661 CAGA-CGC-- ---UAUGGCC UGUACUGCAU U-UCCC-AGA G-CUGUGGGA CC-UGCAAAU 721 CU--GCGCU- -GGUCAUACA UUU // LOCUS CownoseRay 740 bp DEFINITION CownoseRay 740 bp TITLE Rhinoptera bonasus ORIGIN 1 ---------- ------GCGU CCAGCUGCGG GG---AGAAA GUGUCGUUCU CUAACCCUAA 61 UGCGAGGGCA A-UGCGGG-- --------CC CUU-UGUUUA AAG--UCCCG UUGUCGCGCG 121 AAGCGGGAGC CCUCGCUGUU UUCUU--GGC UAACUUU-CA GCGAUGG-UG A-AAGGGCCU 181 AGC------- ---------- ---------- ---------- ---------- ------AAAG 241 GUUGGGAAGC GUGAUUUAUU GUUGGUGGGC AGAGAG---- AAAAAAGUUU CAGC-CGCG- 301 -GCCUCC--U C--CCCGGCG GCCCAGGACC C--------- ----CCUGUU -GCAACGUGC 361 GAAAUGGCG- ---------- ---------- ---------- ---------G CCUCGGCCC- 421 ---CCACCUU UGCUCGCA-- UGCCC----- AGCC--GAGU --------AG GCCGCGGUCA 481 GCGC--CGGC UUC-CACGCC AGUGU-GGGG CUUGAUGCUG UCGCGAAGAG UUCGUCUCUG 541 UCAGCCU--G GCA------G GGGG----UG CUACGCA-GG GUC--GGGGU ---------- 601 ---------- ------ACGG GG-------- ----GACAGG -GAGAUUAAA UAG-CUUGAC 661 CAGA-CGC-- ---UAUAACC UGUACUGCAU C-UCCC-AGA G-CUGUGGGA CC-UGCAAAU 721 CU--GCGCU- -GGUCAUACA UUU // LOCUS structure 740 aa DEFINITION structure 740 aa TITLE structure ORIGIN 1 ~~~~~~~~~~ ~~~~~~~((( (((((((((( (((((((((~ ~~~~~~~~~~ CUAACCCU~~ 61 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~(( (((|------ ---------- ---------- 121 --------|( ((((((((~~ ~~~~~~~~(( (((((((~)) )))))))~~~ ~~)))))~|- 181 ---------- ---------- ---------- ---------- ---------- -------||- 241 ---------- ---------- ---------- ---------| ~~)))~)))~ ~)))~~~~~~ 301 ~))))))))) )))))))))) )))))))))) ~~~~~~~~~~ ~~~~(((((( |--------- 361 ---------- ---------- ---------- ---------- ---------- ---------- 421 ---------- ---------- ---------| ((((~~~~~~ ~~~~~~~~~~ ~~(((((~(( 481 ((~|------ ---------- ---------- ----|~)))) )))))~(((( ~~~~~))))~ 541 ~~~~~~~~~) )))|------ ---------- ---------- ---------- ---------- 601 ---------- ---------- ---------- --|~)))))) ~~ANANNAA~ ~~~~~~~((( 661 (~~~~(((~~ ~~~~~~~~~~ ~~~~~((((~ ~~((((~~~~ ~~~~~~)))) ~~~))))~~~ 721 ~~~~)))~~~ ~))))~~ACA // LOCUS 741 aa DEFINITION 741 aa TITLE ORIGIN 1 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~P1~ ~~~~~~~~~~ ~~~~~~~~~~ Template~~ 61 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~P 2a~~~~~~~~ ~~~~~~~~J2 a|2b~~~~~~ 121 ~~~~~~~~~~ ~~P2b~~~~~ ~~~~~~~~~~ ~~P3~~~~~~ ~P2b~~~~~~ ~~~P2a~~~~ 181 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~J2a|3~ 241 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~P3~~ ~~~~~~~~~~ 301 ~~~~~~~~~~ ~~~~~P1~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~P4~~ ~~~~~~~~~~ 361 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~Hyp ervariable ~paired~re gion~~~~~~ 421 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~P5~~~~~~~ ~~~~~~~~~~ ~~~~~~P6~~ 481 ~~~~~~~~~~ ~~~~~~~~L6 ~~~~~~~~~~ ~~~~~~~~~P 6~~~~~P6.1 ~~~~~P6.1~ 541 ~~~~~~~~~~ P5~~~~~~~~ ~~~~~~~~~~ ~Hypervari able~paire d~region~~ 601 ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~P4~~ ~~~~BoxH~~ ~~~~~~~P7a 661 ~~~~~P7b~~ ~~~~~~~~~~ ~~~~~~P8a~ ~~~P8b~~~~ ~~~~~~~P8b ~~~~P8a~~~ 721 ~~~~P7b~~~ ~~P7a~BoxA CA //